Research and Education

Scientific publishing

Research

Scientific publishing

2023

Multiomic analysis of malignant pleural mesothelioma identifies molecular axes and specialized tumor profiles driving intertumor heterogeneity.
Nat Genet

Mangiante L, Alcala N, Sexton-Oates A, Di Genova A, Gonzalez-Perez A, Khandekar A, Bergstrom EN, Kim J, Liu X, Blazquez-Encinas R, Giacobi C, Le Stang N, Boyault S, Cuenin C, Tabone-Eglinger S, Damiola F, Voegele C, Ardin M, Michallet MC, Soudade L, Delhomme TM, Poret A, Brevet M, Copin MC, Giusiano-Courcambeck S, Damotte D, Girard C, Hofman V, Hofman P, Mouroux J, Cohen C, Lacomme S, Mazieres J, de Montpreville VT, Perrin C, Planchard G, Rousseau N, Rouquette I, Sagan C, Scherpereel A, Thivolet F, Vignaud JM, Jean D, Ilg AGS, Olaso R, Meyer V, Boland-Auge A, Deleuze JF, Altmuller J, Nuernberg P, Ibáñez-Costa A, Castaño JP, Lantuejoul S, Ghantous A, Maussion C, Courtiol P, Hernandez-Vargas H, Caux C, Girard N, Lopez-Bigas N, Alexandrov LB, Galateau-Salle F, Foll M, Fernandez-Cuesta L
 

2023 APR;55(4):607-618

Interim Storage of Biospecimen at Satellite Collection Centers: Dewar and Cryotube Choice Are Important for Temporary Storage in Liquid Nitrogen.
Biopreserv Biobank

Niedermair T, Bhatt M, Babel M, Feustel M, Mamilos A, Schweikl H, Ferstl G, Hofman P, Brochhausen C.

2023 APR;21(2):149-157

Need for a Dedicated Ophthalmic Malignancy Clinico-Biological Biobank: The Nice Ocular MAlignancy (NOMA) Biobank.
Cancers (Basel)

Martel A, Gastaud L, Bonnetaud C, Nahon-Esteve S, Washetine K, Bordone O, Salah M, Tanga V, Fayada J, Lespinet V, Allegra M, Lalvee S, Zahaf K, Baillif S, Bertolotto C, Mograbi B, Lassalle S, Hofman P

2023 APR 19;15(8):2372

Clouds across the new dawn for clinical, diagnostic and biological data: accelerating the development, delivery and uptake of personalized medicine.
Diagnosis (Berl)

Horgan D, Capoluongo E, Dube F, Trapani D, Malapelle U, Rovite V, Omar MI, Alix-Panabières C, Rutkowski P, Bayle A, Hackshaw A, Hofman P, Subbiah V.

2023 APR 10;10(4):356-362

Host genetic variability and determinants of severe COVID-19.
Trends Genet

Brest P, Mograbi B, Gal J, Hofman P, Milano G.

2023 MAR 39(3):169-171

2022

Accelerating the Development and Validation of Liquid Biopsy for Early Cancer Screening and Treatment Tailoring.
Healthcare (Basel).

Horgan D, Cufer T, Gatto F, Lugowska I, Verbanac D, Carvalho Â, Lal JA, Kozaric M, Toomey S, Ivanov HY, Longshore J, Malapelle U, Hasenleithner S, Hofman P, Alix-Panabières C.

2022 Sep 7;10(9):1714.

Coupling live-cell imaging and in situ isolation of the same single cell to profile the transient states of predicted drug-tolerant cells.
J. STAR Protoc.

Bian B, Paquet A, Arguel MJ, Meyer M, Peyre L, Chalabi A, Péré M, Lebrigand K, Waldmann R, Barbry P, Hofman P, Roux

2022 Aug 18;3(3):101600

Identification of a circulating immunological signature predictive of response to immune checkpoint inhibitors in patients with advanced non-small cell lung cancer.
Clin Transl Med.

Khatir W, Humbert O, Benzaquen J, Bontoux C, Neels J, Berland L, Rivera FAG, Allegra M, Salah M, Tanga V, Bordone O, Fayada J, Lespinet-Fabre V, Bohly D, Long-Mira E, Lassalle S, Vouret V, Brest P, Mograbi B, Maniel C, Otto J, Boutros J, Heeke S, Hofman V, Marquette CH, Hofman P, Ilié M. 

2022 Aug;12(8):e1018

Escape of SARS-CoV-2 Variant Omicron to Mucosal Immunity in Vaccinated Subjects.
Open Forum Infect Dis

Martinuzzi E, Boutros J, Glaichenhaus N, Marquette CH, Hofman P, Benzaquen J.
 

2022 Jul 25;9(8):ofac362

Autophagopathies: from autophagy gene polymorphisms to precision medicine for human diseases.
Autophagy.

Grosjean I, Roméo B, Domdom MA, Belaid A, D'Andréa G, Guillot N, Gherardi RK, Gal J, Milano G, Marquette CH, Hung RJ, Landi MT, Han Y, Brest P, Von Bergen M, Klionsky DJ, Amos CI, Hofman P, Mograbi B.

2022 Apr 6:1-18.

Endoscopic Follow-up of Low Grade Precancerous Bronchial Lesions in High-Risk Patients: long-term results of the SELEPREBB randomized multicentre trial.
Eur Respir J.

Guisier F, Deslee G, Birembaut P, Escarguel B, Chapel F, Bota S, Métayer J, Lachkar S, Capron F, Homasson JP, Taulelle M, Quintana M, Raspaud C, Messelet D, Benzaquen J, Hofman P, Baddredine J, Paris C, Cales V, Laurent P, Vignaud JM, Ménard O, Copin MC, Ramon P, Bouchindhomme B, Tavernier JY, Quintin I, Quiot JJ, Galateau-Sallé F, Zalcman G, Piton N, Thiberville L.

2022 Mar 2:2101946.

Deep Learning Facilitates Distinguishing Histologic Subtypes of Pulmonary Neuroendocrine Tumors on Digital Whole-Slide Images.
Cancers (Basel)

Ilié M, Benzaquen J, Tourniaire P, Heeke S, Ayache N, Delingette H, Long-Mira E, Lassalle S, Hamila M, Fayada J, Otto J, Cohen C, Gomez-Caro A, Berthet JP, Marquette CH, Hofman V, Bontoux C, Hofman P.

2022 Mar 29;14(7):1740

Daily Practice Assessment of KRAS Status in NSCLC Patients: A New Challenge for the Thoracic Pathologist Is Right around the Corner.
Cancers (Basel)

Bontoux C, Hofman V, Brest P, Ilié M, Mograbi B, Hofman P.

2022 Mar 23;14(7):1628

The hexosamine pathway and coat complex II promote malignant adaptation to nutrient scarcity.
Life Sci Alliance.

Dragic H, Barthelaix A, Duret C, Le Goupil S, Laprade H, Martin S, Brugière S, Couté Y, Machon C, Guitton J, Rudewicz J, Hofman P, Lebecque S, Chaveroux C, Ferraro-Peyret C, Renno T, Manié SN

 

2022 Apr 8;5(7):e202101334

Analytical validation of automated multiplex chromogenic immunohistochemistry for diagnostic and predictive purpose in non-small cell lung cancer.
Lung Cancer.

Ilié M, Beaulande M, Long-Mira E, Bontoux C, Zahaf K, Lalvée S, Hamila M, Benzaquen J, Cohen C, Berthet JP, Marquette CH, Lassalle S, Hofman V, Hofman P.

 

2022 Feb 3;166:1-8.

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